Comperative and Evolutionary Genomics Lab.

Comperative and Evolutionary Genomics Lab.

Contributors

Principal Investigator (PI):
Dr. Amir Ali Abbasi Professor National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan
DEVELOPERS:
Ramsha Azhar M.Phil. Bioinformatics (Medium of instructions: English) National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Dissertation Topic: "PhyloEasy: A Python Framework for Phylogeny Inference and its Integration into PAHG Database" Programing Expertise: MySQL Databases, Django Web-App Developer, PHP, Python, R, CSS, HTML
Muhammad Faizan Malik M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Dissertation Topic: "Interactive view of 220 human multigene families spread across human genome available at PAHG database."
Neenish Rana M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Dissertation Topic: "Genome-wide Mapping of Duplications on Human Paralogy Blocks to Infer Their Impact on Vertebrate Evolution."
Muhammad Waqas Khokhar M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Dissertation Topic: "Graphical Insight into Evolutionary History of Paralogy Blocks Residing on Vertebrate Genome."
Yasir Mahmood Abbasi Programmer/ Network Manager National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan
Qanta Khalid M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan
Rozeena Arif M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Dissertation Topic: "Dynamic Framework for Comparative and Interactive Phylogenomic Analysis of Human Paralogy Blocks."

DATA CONTRIBUTORS:
Nashaiman Pervaiz PhD. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Evolutionary history of the human multigene families reveals widespread gene duplications throughout the history of animals. BMC Evol Biol 19, 128 (2019).
Farhan Haq PhD. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Fourfold paralogy regions on human HOX-bearing chromosomes: Role of ancient segmental duplications in the evolution of vertebrate genome, Molecular Phylogenetics and Evolution. 66(3): 737–747.
Sadaf Ambreen M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Integrating large-scale phylogenetic datasets to dissect the ancient evolutionary history of vertebrate genome. Molecular Phylogenetics and Evolution. 78: 1-13.
Faiqa Khalil M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Integrating large-scale phylogenetic datasets to dissect the ancient evolutionary history of vertebrate genome. Molecular Phylogenetics and Evolution. 78: 1-13.
Zainab Asrar M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Fourfold paralogy regions on human HOX-bearing chromosomes: Role of ancient segmental duplications in the evolution of vertebrate genome Molecular Phylogenetics and Evolution. 66(3): 737–747.
Hafsa Hanif M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenetic history of paralogous gene quartets on human chromosomes 1, 2, 8 and 20 provides no evidence in favor of the vertebrate octoploidy hypothesis. Molecular Phylogenetics and Evolution. 63: 922-927.
Wajiya Ajmal M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenetic investigation of human FGFR-bearing paralogons favors piecemeal duplication theory of vertebrate genome evolution. Molecular Phylogenetics and Evolution. 81: 49-60.
Hiba Khan M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenetic investigation of human FGFR-bearing paralogons favors piecemeal duplication theory of vertebrate genome evolution. Molecular Phylogenetics and Evolution. 81: 49-60.
Madiha Hafeez M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenomic analysis reveals ancient segmental duplications in the human genome. Molecular Phylogenetics and Evolution. 94: 95-100.
Madeeha Shabeer M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenomic analysis reveals ancient segmental duplications in the human genome. Molecular Phylogenetics and Evolution. 94: 95-100.
Fouzia Altaf M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Phylogenomic analysis reveals ancient segmental duplications in the human genome. Molecular Phylogenetics and Evolution. 94: 95-100.
Roheena Naz M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan An insight into the evolutionary history of human MHC paralogon. Molecular Phylogenetics and Evolution.
Sadaf Tahir M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan An insight into the evolutionary history of human MHC paralogon. Molecular Phylogenetics and Evolution.
Nazia Shakeel M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Evolutionary history of the human multigene families reveals widespread gene duplications throughout the history of animals. BMC Evol Biol 19, 128 (2019).
Ayesha Qasim M.Phil. Bioinformatics National Center for Bioinformatics Quaid-i-Azam University Islamabad, Pakistan Evolutionary history of the human multigene families reveals widespread gene duplications throughout the history of animals. BMC Evol Biol 19, 128 (2019).